# This file was generated by PredictMD version 0.32.0, code name Cephalosporin
# For help, please visit https://predictmd.net
import PredictMDExtra
PredictMDExtra.import_all()
import PredictMD
PredictMD.import_all()
### Begin project-specific settings
DIRECTORY_CONTAINING_THIS_FILE = @__DIR__
PROJECT_DIRECTORY = dirname(
joinpath(splitpath(DIRECTORY_CONTAINING_THIS_FILE)...)
)
PROJECT_OUTPUT_DIRECTORY = joinpath(
PROJECT_DIRECTORY,
"output",
)
mkpath(PROJECT_OUTPUT_DIRECTORY)
mkpath(joinpath(PROJECT_OUTPUT_DIRECTORY, "data"))
mkpath(joinpath(PROJECT_OUTPUT_DIRECTORY, "models"))
mkpath(joinpath(PROJECT_OUTPUT_DIRECTORY, "plots"))
### End project-specific settings
### Begin model comparison code
Random.seed!(999)
trainingandtuning_features_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"trainingandtuning_features_df.csv",
)
trainingandtuning_labels_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"trainingandtuning_labels_df.csv",
)
testing_features_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"testing_features_df.csv",
)
testing_labels_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"testing_labels_df.csv",
)
training_features_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"training_features_df.csv",
)
training_labels_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"training_labels_df.csv",
)
tuning_features_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"tuning_features_df.csv",
)
tuning_labels_df_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"data",
"tuning_labels_df.csv",
)
trainingandtuning_features_df = DataFrames.DataFrame(
FileIO.load(
trainingandtuning_features_df_filename;
type_detect_rows = 100,
)
)
trainingandtuning_labels_df = DataFrames.DataFrame(
FileIO.load(
trainingandtuning_labels_df_filename;
type_detect_rows = 100,
)
)
testing_features_df = DataFrames.DataFrame(
FileIO.load(
testing_features_df_filename;
type_detect_rows = 100,
)
)
testing_labels_df = DataFrames.DataFrame(
FileIO.load(
testing_labels_df_filename;
type_detect_rows = 100,
)
)
training_features_df = DataFrames.DataFrame(
FileIO.load(
training_features_df_filename;
type_detect_rows = 100,
)
)
training_labels_df = DataFrames.DataFrame(
FileIO.load(
training_labels_df_filename;
type_detect_rows = 100,
)
)
tuning_features_df = DataFrames.DataFrame(
FileIO.load(
tuning_features_df_filename;
type_detect_rows = 100,
)
)
tuning_labels_df = DataFrames.DataFrame(
FileIO.load(
tuning_labels_df_filename;
type_detect_rows = 100,
)
)
linear_regression_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"models",
"linear_regression.jld2",
)
random_forest_regression_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"models",
"random_forest_regression.jld2",
)
knet_mlp_regression_filename = joinpath(
PROJECT_OUTPUT_DIRECTORY,
"models",
"knet_mlp_regression.jld2",
)
linear_regression =
PredictMD.load_model(linear_regression_filename)
random_forest_regression =
PredictMD.load_model(random_forest_regression_filename)
knet_mlp_regression =
PredictMD.load_model(knet_mlp_regression_filename)
PredictMD.parse_functions!(linear_regression)
PredictMD.parse_functions!(random_forest_regression)
PredictMD.parse_functions!(knet_mlp_regression)
all_models = PredictMD.AbstractFittable[
linear_regression,
random_forest_regression,
knet_mlp_regression,
]
single_label_name = :MedV
continuous_label_names = Symbol[single_label_name]
categorical_label_names = Symbol[]
label_names = vcat(categorical_label_names, continuous_label_names)
println("Single label regression metrics, training set: ")
show(
PredictMD.singlelabelregressionmetrics(
all_models,
training_features_df,
training_labels_df,
single_label_name,
);
allrows = true,
allcols = true,
splitcols = false,
)
println("Single label regression metrics, testing set: ")
show(
PredictMD.singlelabelregressionmetrics(
all_models,
testing_features_df,
testing_labels_df,
single_label_name,
);
allrows = true,
allcols = true,
splitcols = false,
)
### End model comparison code
# This file was generated by PredictMD version 0.32.0, code name Cephalosporin
# For help, please visit https://predictmd.net
This page was generated using Literate.jl.